Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_02265 | Not Available | Positive | 2753677 - 2755776 | 78894.6 |
| hypothetical protein | HMPREF9450_02266 | Not Available | Positive | 2756049 - 2756615 | 21769.6 |
| hypothetical protein | HMPREF9450_02267 | Not Available | Negative | 2756896 - 2758350 | 52639.1 |
| ygbb family protein | HMPREF9450_02268 | Not Available | Positive | 2758426 - 2758908 | 17110.8 |
| hypothetical protein | HMPREF9450_02269 | Not Available | Negative | 2758961 - 2759641 | 25303.5 |
| hypothetical protein | HMPREF9450_02270 | Not Available | Positive | 2759931 - 2760557 | 23268.4 |
| hypothetical protein | HMPREF9450_02271 | Not Available | Positive | 2760562 - 2761377 | 30146.3 |
| inosine-5'-monophosphate dehydrogenase | HMPREF9450_02272 | Not Available | Positive | 2761447 - 2762919 | 52822.0 |
| hypothetical protein | HMPREF9450_02273 | Not Available | Positive | 2762924 - 2763337 | 16317.6 |
| hypothetical protein | HMPREF9450_02274 | Not Available | Positive | 2763522 - 2765582 | 78812.1 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
