Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_02225 | Not Available | Negative | 2704434 - 2705504 | 37580.8 |
| hypothetical protein | HMPREF9450_02226 | Not Available | Positive | 2706000 - 2707391 | 53995.2 |
| hypothetical protein | HMPREF9450_02227 | Not Available | Negative | 2707450 - 2708967 | 56318.4 |
| 3-isopropylmalate dehydratase, small subunit | HMPREF9450_02228 | Not Available | Negative | 2709058 - 2709651 | 21908.0 |
| 3-isopropylmalate dehydratase large subunit | HMPREF9450_02229 | Not Available | Negative | 2709688 - 2711091 | 50205.0 |
| 2-isopropylmalate synthase | HMPREF9450_02230 | Not Available | Negative | 2711116 - 2712633 | 54574.6 |
| hypothetical protein | HMPREF9450_02231 | Not Available | Positive | 2712676 - 2713011 | 12611.0 |
| dna repair protein recn | HMPREF9450_02232 | Not Available | Negative | 2712843 - 2714507 | 60444.4 |
| phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase | HMPREF9450_02233 | Not Available | Negative | 2714534 - 2715745 | 43487.5 |
| hypothetical protein | HMPREF9450_02234 | Not Available | Negative | 2715786 - 2716127 | 13012.2 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
