Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_02175 | Not Available | Positive | 2642391 - 2643026 | 23985.0 |
| hypothetical protein | HMPREF9450_02176 | Not Available | Negative | 2643103 - 2643651 | 20061.6 |
| hypothetical protein | HMPREF9450_02177 | Not Available | Negative | 2643658 - 2645937 | 86366.9 |
| reca | HMPREF9450_02178 | Not Available | Negative | 2645965 - 2646972 | 35950.5 |
| hypothetical protein | HMPREF9450_02179 | Not Available | Negative | 2646995 - 2647456 | 16917.3 |
| hypothetical protein | HMPREF9450_02180 | Not Available | Positive | 2647752 - 2648804 | 39459.0 |
| hypothetical protein | HMPREF9450_02181 | Not Available | Positive | 2648816 - 2649544 | 27073.2 |
| chromosomal replication initiator protein dnaa | HMPREF9450_02182 | Not Available | Negative | 2649637 - 2651049 | 53155.4 |
| hypothetical protein | HMPREF9450_02183 | Not Available | Positive | 2651285 - 2653024 | 64606.3 |
| hypothetical protein | HMPREF9450_02184 | Not Available | Positive | 2653041 - 2653427 | 14620.0 |
Pathways
282 pathways
Health Effects
No health effects information available for this bacterium.
