Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_02165 | Not Available | Negative | 2631377 - 2631745 | 13377.1 |
| galactokinase | HMPREF9450_02166 | Not Available | Negative | 2631861 - 2633012 | 42091.4 |
| trna pseudouridine synthase a | HMPREF9450_02167 | Not Available | Negative | 2633041 - 2633796 | 28607.9 |
| dihydrodipicolinate reductase | HMPREF9450_02168 | Not Available | Positive | 2633924 - 2634640 | 26234.6 |
| hypothetical protein | HMPREF9450_02169 | Not Available | Positive | 2634695 - 2636068 | 53208.1 |
| hypothetical protein | HMPREF9450_02170 | Not Available | Positive | 2636075 - 2636692 | 23102.6 |
| aspartate carbamoyltransferase | HMPREF9450_02171 | Not Available | Positive | 2636708 - 2637619 | 34334.2 |
| aspartate carbamoyltransferase, regulatory subunit | HMPREF9450_02172 | Not Available | Positive | 2637636 - 2638097 | 17333.3 |
| excinuclease abc, a subunit | HMPREF9450_02173 | Not Available | Positive | 2638103 - 2641159 | 113479.0 |
| hypothetical protein | HMPREF9450_02174 | Not Available | Positive | 2641166 - 2642383 | 46087.2 |
Pathways
282 pathways
Health Effects
No health effects information available for this bacterium.
