Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate nucleotide adenylyltransferase | HMPREF9450_02155 | Not Available | Positive | 2619454 - 2620077 | 23290.0 |
| hypothetical protein | HMPREF9450_02156 | Not Available | Positive | 2620064 - 2620312 | 9619.24 |
| hypothetical protein | HMPREF9450_02157 | Not Available | Positive | 2620409 - 2621386 | 35730.1 |
| hypothetical protein | HMPREF9450_02158 | Not Available | Negative | 2621615 - 2623777 | 82193.5 |
| hypothetical protein | HMPREF9450_02159 | Not Available | Positive | 2623986 - 2624561 | 21555.8 |
| hypothetical protein | HMPREF9450_02160 | Not Available | Positive | 2624635 - 2625723 | 40948.8 |
| hypothetical protein | HMPREF9450_02161 | Not Available | Negative | 2625869 - 2626849 | 35744.8 |
| yggs family pyridoxal phosphate enzyme | HMPREF9450_02162 | Not Available | Negative | 2626927 - 2627592 | 24823.0 |
| hypothetical protein | HMPREF9450_02163 | Not Available | Positive | 2627682 - 2629370 | 63045.8 |
| hypothetical protein | HMPREF9450_02164 | Not Available | Negative | 2629501 - 2631165 | 63100.9 |
Pathways
282 pathways
Health Effects
No health effects information available for this bacterium.
