Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_02135 | Not Available | Negative | 2599495 - 2599989 | 17560.9 |
| hypothetical protein | HMPREF9450_02136 | Not Available | Negative | 2600050 - 2601624 | 58579.5 |
| hypothetical protein | HMPREF9450_02137 | Not Available | Negative | 2601633 - 2603081 | 53029.3 |
| hypothetical protein | HMPREF9450_02138 | Not Available | Negative | 2603096 - 2603854 | 28552.0 |
| miab-like trna modifying enzyme | HMPREF9450_02139 | Not Available | Negative | 2603917 - 2605266 | 49544.3 |
| hypothetical protein | HMPREF9450_02140 | Not Available | Positive | 2605314 - 2606147 | 30092.0 |
| hypothetical protein | HMPREF9450_02141 | Not Available | Positive | 2606144 - 2607622 | 55804.2 |
| riboflavin biosynthesis protein ribba | HMPREF9450_02142 | Not Available | Positive | 2607597 - 2608820 | 45368.0 |
| hypothetical protein | HMPREF9450_02143 | Not Available | Positive | 2608832 - 2609212 | 14081.6 |
| methionyl-trna formyltransferase | HMPREF9450_02144 | Not Available | Positive | 2609411 - 2610343 | 34138.3 |
Pathways
282 pathways
Health Effects
No health effects information available for this bacterium.
