Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-tyrosyl-trna(tyr) deacylase | HMPREF9450_00118 | Not Available | Negative | 122215 - 122667 | 16369.6 |
| thiazole biosynthesis protein thih | HMPREF9450_00119 | Not Available | Negative | 122733 - 123887 | 44629.7 |
| thiazole synthase | HMPREF9450_00120 | Not Available | Negative | 124182 - 124967 | 27463.5 |
| hypothetical protein | HMPREF9450_00121 | Not Available | Negative | 125047 - 126561 | 53753.2 |
| thiamine biosynthesis protein this | HMPREF9450_00122 | Not Available | Negative | 126566 - 126763 | 6759.0 |
| hypothetical protein | HMPREF9450_00123 | Not Available | Positive | 127298 - 128314 | 36887.2 |
| hypothetical protein | HMPREF9450_00124 | Not Available | Positive | 128399 - 129325 | 33927.9 |
| hypothetical protein | HMPREF9450_00125 | Not Available | Negative | 129386 - 130387 | 37467.5 |
| phosphoribosylamine-glycine ligase | HMPREF9450_00126 | Not Available | Negative | 130469 - 131770 | 45838.9 |
| homoserine o-acetyltransferase | HMPREF9450_00127 | Not Available | Negative | 131942 - 132979 | 37509.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
