Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_01075 | Not Available | Negative | 1358521 - 1359378 | 33227.1 |
| hypothetical protein | HMPREF9450_01076 | Not Available | Negative | 1359425 - 1359676 | 9345.21 |
| ribonuclease hii | HMPREF9450_01077 | Not Available | Negative | 1359997 - 1360608 | 23065.9 |
| hypothetical protein | HMPREF9450_01078 | Not Available | Negative | 1360601 - 1363654 | 115011.0 |
| cysteinyl-trna synthetase | HMPREF9450_01079 | Not Available | Positive | 1363779 - 1365245 | 55525.0 |
| hypothetical protein | HMPREF9450_01080 | Not Available | Positive | 1365419 - 1366354 | 33768.1 |
| 5'/3'-nucleotidase sure | HMPREF9450_01081 | Not Available | Negative | 1366356 - 1367210 | 31709.5 |
| 50s ribosomal protein l19 | HMPREF9450_01082 | Not Available | Positive | 1367411 - 1367773 | 13657.9 |
| hypothetical protein | HMPREF9450_01083 | Not Available | Negative | 1367901 - 1371275 | 125225.0 |
| hypothetical protein | HMPREF9450_01084 | Not Available | Positive | 1371496 - 1372431 | 34977.8 |
Pathways
282 pathways
Health Effects
No health effects information available for this bacterium.
