Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent protease la | HMPREF9450_00098 | Not Available | Negative | 95837 - 98263 | 90008.0 |
| valyl-trna synthetase | HMPREF9450_00099 | Not Available | Positive | 98738 - 101398 | 100441.0 |
| hypothetical protein | HMPREF9450_00100 | Not Available | Negative | 101665 - 103311 | 60506.7 |
| hypothetical protein | HMPREF9450_00101 | Not Available | Negative | 104425 - 104697 | 10512.1 |
| hypothetical protein | HMPREF9450_00102 | Not Available | Positive | 104906 - 105577 | 25348.7 |
| uracil-dna glycosylase | HMPREF9450_00103 | Not Available | Positive | 105729 - 106391 | 24510.2 |
| hypothetical protein | HMPREF9450_00104 | Not Available | Positive | 106835 - 108346 | 56015.6 |
| hypothetical protein | HMPREF9450_00105 | Not Available | Positive | 108358 - 108972 | 23004.7 |
| hypothetical protein | HMPREF9450_00106 | Not Available | Positive | 108991 - 109608 | 23317.2 |
| hypothetical protein | HMPREF9450_00107 | Not Available | Positive | 109616 - 110242 | 23647.8 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
