Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_01008 | Not Available | Negative | 1283066 - 1283761 | 26570.6 |
| hypothetical protein | HMPREF9450_01009 | Not Available | Positive | 1283821 - 1284690 | 32304.3 |
| hypothetical protein | HMPREF9450_01010 | Not Available | Negative | 1284702 - 1285250 | 20280.3 |
| hypothetical protein | HMPREF9450_01011 | Not Available | Negative | 1285402 - 1285974 | 21707.9 |
| hypothetical protein | HMPREF9450_01012 | Not Available | Negative | 1286008 - 1286556 | 20074.1 |
| ribosome recycling factor | HMPREF9450_01013 | Not Available | Negative | 1286923 - 1287483 | 20531.8 |
| hypothetical protein | HMPREF9450_01014 | Not Available | Negative | 1287503 - 1288129 | 22577.2 |
| uridylate kinase | HMPREF9450_01015 | Not Available | Negative | 1288186 - 1288899 | 25151.8 |
| hypothetical protein | HMPREF9450_01016 | Not Available | Negative | 1289056 - 1289931 | 32256.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | HMPREF9450_01017 | Not Available | Positive | 1289994 - 1292036 | 74343.2 |
Pathways
282 pathways
Health Effects
No health effects information available for this bacterium.
