Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_00969 | Not Available | Positive | 1229495 - 1230073 | 21585.9 |
| mannose-6-phosphate isomerase, class i | HMPREF9450_00970 | Not Available | Negative | 1230223 - 1231191 | 36213.6 |
| udp-glucose 4-epimerase | HMPREF9450_00971 | Not Available | Positive | 1231312 - 1232337 | 37420.7 |
| hypothetical protein | HMPREF9450_00972 | Not Available | Negative | 1232579 - 1233061 | 18266.2 |
| hypothetical protein | HMPREF9450_00973 | Not Available | Negative | 1233239 - 1235197 | 73515.7 |
| hypothetical protein | HMPREF9450_00974 | Not Available | Negative | 1235402 - 1235989 | 20934.3 |
| excinuclease abc, b subunit | HMPREF9450_00975 | Not Available | Positive | 1236081 - 1238123 | 77101.9 |
| hypothetical protein | HMPREF9450_00976 | Not Available | Positive | 1238174 - 1238659 | 18585.3 |
| hypothetical protein | HMPREF9450_00977 | Not Available | Negative | 1238763 - 1239503 | 26317.7 |
| hypothetical protein | HMPREF9450_00978 | Not Available | Negative | 1239593 - 1240693 | 39932.1 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
