Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 2 | HMPREF9450_00088 | Not Available | Negative | 80331 - 81413 | 41082.6 |
| hypothetical protein | HMPREF9450_00089 | Not Available | Negative | 81783 - 82604 | 30297.7 |
| hypothetical protein | HMPREF9450_00090 | Not Available | Negative | 82814 - 84643 | 67956.6 |
| tryptophanyl-trna synthetase | HMPREF9450_00091 | Not Available | Positive | 85034 - 86023 | 36597.1 |
| hypothetical protein | HMPREF9450_00092 | Not Available | Positive | 86416 - 88212 | 65629.0 |
| hypothetical protein | HMPREF9450_00093 | Not Available | Negative | 88472 - 89455 | 37213.4 |
| adenosylmethionine-8-amino-7-oxononanoate transaminase | HMPREF9450_00094 | Not Available | Positive | 89961 - 91253 | 47762.9 |
| trna methyl transferase | HMPREF9450_00095 | Not Available | Negative | 91628 - 92863 | 46061.9 |
| hypothetical protein | HMPREF9450_00096 | Not Available | Negative | 93070 - 93960 | 31760.3 |
| hypothetical protein | HMPREF9450_00097 | Not Available | Positive | 94361 - 95428 | 39055.6 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
