Alistipes sp. AM16-43

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. AM16-43 is a Gram-negative bacterium characterized by the presence of flagella, which suggests it has the capability for motility. This organism is notable for having a single replicon, indicating a singular chromosome structure, which is a common feature among many bacteria. The accession number for Alistipes sp. AM16-43 is QTUQ00000000.1, which provides a reference for its genomic information in biological databases. This information is essential for further studies regarding its genetic makeup and potential applications in microbiology. In terms of ecological insight, the presence of flagella in Alistipes sp. AM16-43 may play a significant role in its environmental adaptability and survival. Motility can facilitate the organism's movement toward favorable habitats or resources, which may enhance its ability to colonize specific niches. Understanding the functional traits of Alistipes sp. AM16-43 could offer valuable insights into its role in microbial communities and its interactions within various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. AM16-43
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. AM16-43 AM16-43.Scaf26, whole genome shotgun

Gene Summary

Adenine Count

692319 bp

Thymine Count

711943 bp

Guanine Count

981680 bp

Cytosine Count

980158 bp

Genome Length

3366396 bp

Protein-coding Genes

2718 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4133 domain-containing proteinDW189_13485Not AvailablePositive3220616 - 322095112633.1
hypothetical proteinDW189_13495Not AvailableNegative3222090 - 322262618822.3
duf3408 domain-containing proteinDW189_13500Not AvailableNegative3222639 - 322323522257.6
duf3408 domain-containing proteinDW189_13505Not AvailableNegative3223259 - 322372917683.3
para family proteinDW189_13510Not AvailableNegative3223732 - 322448728600.0
mobilization proteinDW189_13515Not AvailablePositive3225014 - 322543316490.2
relaxaseDW189_13520Not AvailablePositive3225418 - 322664747177.7
glycoside hydrolase family 92 proteinDW189_13530Not AvailableNegative3228756 - 323101184866.5
metal-independent alpha-mannosidaseDW189_13535Not AvailableNegative3231032 - 3234610132457.0
glycoside hydrolase family 92 proteinDW189_13540Not AvailableNegative3234611 - 323684883667.6

Displaying genes 2641 – 2650 of 2770 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.