Alistipes sp. AM16-43

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. AM16-43 is a Gram-negative bacterium characterized by the presence of flagella, which suggests it has the capability for motility. This organism is notable for having a single replicon, indicating a singular chromosome structure, which is a common feature among many bacteria. The accession number for Alistipes sp. AM16-43 is QTUQ00000000.1, which provides a reference for its genomic information in biological databases. This information is essential for further studies regarding its genetic makeup and potential applications in microbiology. In terms of ecological insight, the presence of flagella in Alistipes sp. AM16-43 may play a significant role in its environmental adaptability and survival. Motility can facilitate the organism's movement toward favorable habitats or resources, which may enhance its ability to colonize specific niches. Understanding the functional traits of Alistipes sp. AM16-43 could offer valuable insights into its role in microbial communities and its interactions within various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. AM16-43
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. AM16-43 AM16-43.Scaf26, whole genome shotgun

Gene Summary

Adenine Count

692319 bp

Thymine Count

711943 bp

Guanine Count

981680 bp

Cytosine Count

980158 bp

Genome Length

3366396 bp

Protein-coding Genes

2718 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s20DW189_13285Not AvailableNegative3184053 - 31843049271.41
Trna-gluNot AvailableNot AvailablePositive3184489 - 3184563Not Available
abc transporter atp-binding proteinDW189_13295Not AvailableNegative3184664 - 318541926878.8
iron abc transporter permeaseDW189_13300Not AvailableNegative3185484 - 318649134520.0
hypothetical proteinDW189_13305Not AvailableNegative3186492 - 318740934828.8
iron abc transporter substrate-binding proteinDW189_13310Not AvailableNegative3187409 - 318856342297.4
Trna-proNot AvailableNot AvailablePositive3188644 - 3188718Not Available
arac family transcriptional regulatorDW189_13320Not AvailablePositive3189250 - 319010733029.5
rtec proteinDW189_13325Not AvailablePositive3190213 - 319107333749.5
dna-binding proteinDW189_13330Not AvailablePositive3191472 - 319178312198.8

Displaying genes 2601 – 2610 of 2770 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.