Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. AM16-43 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
692319 bp
Thymine Count
711943 bp
Guanine Count
981680 bp
Cytosine Count
980158 bp
Genome Length
3366396 bp
Protein-coding Genes
2718 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | DW189_12670 | Not Available | Positive | 3021345 - 3022625 | 48425.5 |
| tpm domain-containing protein | DW189_12675 | Not Available | Positive | 3022847 - 3023755 | 32231.9 |
| lema family protein | DW189_12680 | Not Available | Positive | 3023899 - 3024474 | 21359.3 |
| bax inhibitor (bi)-1/ycca family protein | DW189_12685 | Not Available | Negative | 3024550 - 3025263 | 26097.6 |
| duf4396 domain-containing protein | DW189_12690 | Not Available | Negative | 3025399 - 3026106 | 24622.4 |
| site-specific integrase | DW189_12695 | Not Available | Positive | 3027181 - 3028410 | 46971.7 |
| mobilization protein | DW189_12700 | Not Available | Positive | 3028952 - 3029371 | 16465.0 |
| alpha-l-fucosidase | DW189_12715 | Not Available | Positive | 3032076 - 3033386 | 49526.6 |
| transglutaminase domain-containing protein | DW189_12720 | Not Available | Positive | 3033383 - 3036004 | 96844.5 |
| copper homeostasis protein cutc | DW189_12725 | Not Available | Positive | 3036014 - 3036745 | 26051.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
