Alistipes sp. AM16-43

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. AM16-43 is a Gram-negative bacterium characterized by the presence of flagella, which suggests it has the capability for motility. This organism is notable for having a single replicon, indicating a singular chromosome structure, which is a common feature among many bacteria. The accession number for Alistipes sp. AM16-43 is QTUQ00000000.1, which provides a reference for its genomic information in biological databases. This information is essential for further studies regarding its genetic makeup and potential applications in microbiology. In terms of ecological insight, the presence of flagella in Alistipes sp. AM16-43 may play a significant role in its environmental adaptability and survival. Motility can facilitate the organism's movement toward favorable habitats or resources, which may enhance its ability to colonize specific niches. Understanding the functional traits of Alistipes sp. AM16-43 could offer valuable insights into its role in microbial communities and its interactions within various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. AM16-43
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. AM16-43 AM16-43.Scaf26, whole genome shotgun

Gene Summary

Adenine Count

692319 bp

Thymine Count

711943 bp

Guanine Count

981680 bp

Cytosine Count

980158 bp

Genome Length

3366396 bp

Protein-coding Genes

2718 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna primaseDW189_00700Not AvailablePositive179528 - 18150174112.8
ssra-binding protein smpbDW189_00705Not AvailablePositive181724 - 18218817869.7
cof-type had-iib family hydrolaseDW189_00710Not AvailablePositive182185 - 18296727736.2
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsabDW189_00715Not AvailablePositive182987 - 18369425179.2
hypothetical proteinDW189_00720Not AvailablePositive183803 - 18436321290.6
dna recombination protein rmucDW189_00725Not AvailableNegative184518 - 18597854308.1
duf4836 family proteinDW189_00730Not AvailablePositive186160 - 18773155871.9
atp-binding cassette domain-containing proteinDW189_00735Not AvailablePositive187802 - 18844923667.5
abc transporter permeaseDW189_00740Not AvailablePositive188446 - 18964243592.2
ribulose-phosphate 3-epimeraseDW189_00745Not AvailablePositive189820 - 19047023279.3

Displaying genes 141 – 150 of 2770 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.