Agrobacterium fabrum

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium fabrum is a gram-negative, aerobic bacterium characterized by its rod shape and mobility, facilitated by the presence of flagella. This organism thrives in various habitats and is classified as mesophilic, with an optimal growth temperature of 25 degrees Celsius. A. fabrum is notable for possessing a single replicon and two membranes, which is typical for gram-negative bacteria. The ecological role of A. fabrum is significant as it is a free-living organism, allowing it to interact with a diverse range of environments. This adaptability may contribute to its survival and proliferation in multiple habitats, emphasizing its ecological versatility. The unique traits of A. fabrum, such as its mobility and aerobic nature, suggest it may play a role in nutrient cycling and soil health, although specific interactions within ecosystems are not detailed in the provided data. Overall, Agrobacterium fabrum exemplifies a well-adapted bacterium that occupies diverse ecological niches, highlighting the importance of microbial diversity in maintaining ecosystem functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium fabrum
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium fabrum
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium fabrum strain PDC82 genome assembly, contig:

Gene Summary

Adenine Count

1136827 bp

Thymine Count

1144814 bp

Guanine Count

1663783 bp

Cytosine Count

1637536 bp

Genome Length

5582960 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-binding cassette, subfamily cSAMN05428983_3080Not AvailablePositive3138169 - 314001665605.9
hlyd family secretion proteinSAMN05428983_3081Not AvailablePositive3140003 - 314131647958.7
transcriptional regulator, lysr familySAMN05428983_3082Not AvailablePositive3141525 - 314243032748.0
peptide/nickel transport system permease proteinSAMN05428983_3083Not AvailablePositive3142578 - 314355535436.7
peptide/nickel transport system permease proteinSAMN05428983_3084Not AvailablePositive3143552 - 314437028990.5
peptide/nickel transport system atp-binding proteinSAMN05428983_3085Not AvailablePositive3144367 - 314600159908.7
beta-lactamase class aSAMN05428983_3086Not AvailablePositive3146015 - 314685730712.4
peptide/nickel transport system substrate-binding proteinSAMN05428983_3087Not AvailablePositive3146854 - 314843157503.7
aminobenzoyl-glutamate utilization protein bSAMN05428983_3088Not AvailablePositive3148559 - 315000151464.3
hypothetical proteinSAMN05428983_3089Not AvailableNegative3150017 - 31501695644.59

Displaying genes 3071 – 3080 of 5241 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.