Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN05444000_10482 | Not Available | Positive | 984161 - 984901 | 27374.7 |
| hypothetical protein | SAMN05444000_10483 | Not Available | Positive | 984888 - 985493 | 22488.8 |
| transcriptional regulator, lysr family | SAMN05444000_10484 | Not Available | Negative | 985510 - 986412 | 33233.9 |
| hypothetical protein | SAMN05444000_10485 | Not Available | Positive | 986521 - 986781 | 9806.92 |
| dihydrolipoamide dehydrogenase | SAMN05444000_10486 | Not Available | Negative | 986836 - 988236 | 48838.0 |
| hypothetical protein | SAMN05444000_10487 | Not Available | Negative | 988349 - 989086 | 28609.2 |
| 2-oxoglutarate dehydrogenase e2 component | SAMN05444000_10488 | Not Available | Negative | 989086 - 990582 | 51745.1 |
| 2-oxoglutarate dehydrogenase e1 component | SAMN05444000_10489 | Not Available | Negative | 990586 - 993546 | 110148.0 |
| hypothetical protein | SAMN05444000_10490 | Not Available | Negative | 993558 - 994343 | 28975.8 |
| succinyl-coa synthetase (adp-forming) alpha subunit | SAMN05444000_10491 | Not Available | Negative | 994346 - 995227 | 30205.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
