Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_10472 | Not Available | Negative | 973896 - 974051 | 5313.63 |
| thiol-disulfide isomerase or thioredoxin | SAMN05444000_10473 | Not Available | Negative | 974083 - 974679 | 21403.8 |
| argininosuccinate lyase | SAMN05444000_10474 | Not Available | Positive | 974706 - 976097 | 50093.6 |
| hypothetical protein | SAMN05444000_10475 | Not Available | Positive | 976548 - 976745 | 6596.89 |
| protein of unknown function | SAMN05444000_10476 | Not Available | Positive | 976813 - 977130 | 11812.8 |
| diaminopimelate decarboxylase | SAMN05444000_10477 | Not Available | Positive | 977301 - 978566 | 45372.4 |
| tigr02302 family protein | SAMN05444000_10478 | Not Available | Positive | 978598 - 981165 | 94060.1 |
| mj0042 family finger-like domain-containing protein | SAMN05444000_10479 | Not Available | Negative | 981167 - 982429 | 46420.7 |
| cell division transport system atp-binding protein | SAMN05444000_10480 | Not Available | Positive | 982600 - 983259 | 23969.1 |
| cell division transport system permease protein | SAMN05444000_10481 | Not Available | Positive | 983256 - 984161 | 31828.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
