Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin molybdotransferase | SAMN05444000_10452 | Not Available | Positive | 955241 - 956500 | 44251.3 |
| hypothetical protein | SAMN05444000_10453 | Not Available | Negative | 956584 - 957606 | 37209.4 |
| transcription elongation factor grea | SAMN05444000_10454 | Not Available | Negative | 957631 - 958101 | 17160.4 |
| electron-transferring-flavoprotein dehydrogenase | SAMN05444000_10455 | Not Available | Positive | 958358 - 960007 | 59806.8 |
| tetratricopeptide repeat-containing protein | SAMN05444000_10456 | Not Available | Positive | 960166 - 961875 | 62583.6 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMN05444000_10457 | Not Available | Positive | 961865 - 962710 | 29824.9 |
| octaprenyl-diphosphate synthase | SAMN05444000_10458 | Not Available | Negative | 962785 - 963786 | 36118.8 |
| putative signal transducing protein | SAMN05444000_10459 | Not Available | Positive | 963842 - 964057 | 8122.91 |
| trna1(val) a37 n6-methylase trmn6 | SAMN05444000_10460 | Not Available | Positive | 964063 - 964830 | 27971.7 |
| hypothetical protein | SAMN05444000_10461 | Not Available | Positive | 965000 - 965164 | 6211.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
