Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_10442 | Not Available | Positive | 947959 - 949677 | 61074.6 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444000_10443 | Not Available | Positive | 949674 - 950720 | 39158.8 |
| hypothetical protein | SAMN05444000_10444 | Not Available | Positive | 950724 - 951188 | 17124.2 |
| aa3 type cytochrome c oxidase subunit iv | SAMN05444000_10445 | Not Available | Positive | 951274 - 951408 | 4770.78 |
| hypothetical protein | SAMN05444000_10446 | Not Available | Positive | 951442 - 952089 | 23682.8 |
| branched-chain amino acid transport protein (azld) | SAMN05444000_10447 | Not Available | Negative | 952243 - 952428 | 6838.68 |
| azlc protein | SAMN05444000_10448 | Not Available | Negative | 952605 - 952838 | 8772.72 |
| fdhd protein | SAMN05444000_10449 | Not Available | Positive | 953196 - 954083 | 32084.4 |
| molybdenum cofactor guanylyltransferase | SAMN05444000_10450 | Not Available | Positive | 954132 - 954749 | 21796.1 |
| molybdopterin guanine dinucleotide biosynthesis accessory protein mobb | SAMN05444000_10451 | Not Available | Positive | 954753 - 955244 | 17838.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
