Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_10432 | Not Available | Negative | 937448 - 937549 | 3519.53 |
| aspartate carbamoyltransferase | SAMN05444000_10433 | Not Available | Negative | 937553 - 938509 | 35508.1 |
| dna polymerase | SAMN05444000_10434 | Not Available | Positive | 938695 - 939477 | 28455.5 |
| hypothetical protein | SAMN05444000_10435 | Not Available | Positive | 939474 - 939761 | 10046.0 |
| molybdenum cofactor biosynthesis protein b | SAMN05444000_10436 | Not Available | Positive | 939771 - 940313 | 20064.8 |
| rnd family efflux transporter, mfp subunit | SAMN05444000_10437 | Not Available | Positive | 940407 - 941870 | 52097.9 |
| multidrug efflux pump subunit acrb | SAMN05444000_10438 | Not Available | Positive | 941877 - 945278 | 122502.0 |
| disulphide bond corrector protein dsbc | SAMN05444000_10439 | Not Available | Negative | 945279 - 946085 | 29038.3 |
| putative transcriptional regulator | SAMN05444000_10440 | Not Available | Positive | 946241 - 946819 | 20075.8 |
| translation factor sua5 | SAMN05444000_10441 | Not Available | Negative | 946895 - 947881 | 33929.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
