Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (uracil1498-n3)-methyltransferase | SAMN05444000_10422 | Not Available | Positive | 929756 - 930481 | 26564.1 |
| acetyltransferase (gnat) family protein | SAMN05444000_10423 | Not Available | Positive | 930478 - 931353 | 32313.3 |
| hypothetical protein | SAMN05444000_10424 | Not Available | Positive | 931350 - 931859 | 18407.6 |
| glutamate--cysteine ligase | SAMN05444000_10425 | Not Available | Positive | 931926 - 933296 | 50618.1 |
| uncharacterized membrane protein yhah, duf805 family | SAMN05444000_10426 | Not Available | Negative | 933350 - 933892 | 20669.0 |
| acyl-phosphate glycerol-3-phosphate acyltransferase | SAMN05444000_10427 | Not Available | Negative | 934027 - 934632 | 21094.6 |
| dihydroorotase | SAMN05444000_10428 | Not Available | Negative | 934632 - 935909 | 45618.9 |
| hypothetical protein | SAMN05444000_10429 | Not Available | Negative | 935906 - 936457 | 20617.8 |
| hypothetical protein | SAMN05444000_10430 | Not Available | Negative | 936454 - 936894 | 16182.8 |
| hypothetical protein | SAMN05444000_10431 | Not Available | Negative | 936891 - 937442 | 19879.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
