Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin synthase subunit moae | SAMN05444000_10412 | Not Available | Positive | 921056 - 921499 | 16556.6 |
| hypothetical protein | SAMN05444000_10413 | Not Available | Negative | 921796 - 922077 | 10506.1 |
| predicted amino acid racemase | SAMN05444000_10414 | Not Available | Negative | 922154 - 923269 | 38998.0 |
| uncharacterized conserved protein, nad-dependent epimerase/dehydratase family | SAMN05444000_10415 | Not Available | Negative | 923266 - 924465 | 42228.7 |
| hypothetical protein | SAMN05444000_10416 | Not Available | Negative | 924565 - 925311 | 27546.7 |
| hypothetical protein | SAMN05444000_10417 | Not Available | Negative | 925301 - 925654 | 12312.8 |
| hypothetical protein | SAMN05444000_10418 | Not Available | Negative | 925651 - 925956 | 11098.9 |
| hypothetical protein | SAMN05444000_10419 | Not Available | Negative | 926399 - 926722 | 12468.7 |
| ompa-ompf porin, oop family | SAMN05444000_10420 | Not Available | Negative | 926709 - 928706 | 71422.8 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05444000_10421 | Not Available | Negative | 928766 - 929743 | 36122.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
