Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| reductive dehalogenase | SAMN05444000_1042 | Not Available | Positive | 909643 - 912858 | 117998.0 |
| enoyl-coa hydratase | SAMN05444000_1043 | Not Available | Positive | 912934 - 913794 | 31414.9 |
| hypothetical protein | SAMN05444000_1044 | Not Available | Positive | 913849 - 913968 | 4276.41 |
| abc-2 type transport system atp-binding protein | SAMN05444000_1045 | Not Available | Positive | 914059 - 914988 | 34036.0 |
| abc-2 type transport system permease protein | SAMN05444000_1046 | Not Available | Positive | 914985 - 915746 | 27745.7 |
| serine protease sohb | SAMN05444000_1047 | Not Available | Positive | 915856 - 916653 | 28806.9 |
| cation:h+ antiporter | SAMN05444000_1048 | Not Available | Positive | 916825 - 917775 | 33606.2 |
| excinuclease abc subunit c | SAMN05444000_1049 | Not Available | Positive | 918227 - 920002 | 65811.9 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | SAMN05444000_10410 | Not Available | Positive | 920135 - 920794 | 24330.4 |
| molybdopterin synthase subunit moad | SAMN05444000_10411 | Not Available | Positive | 920800 - 921051 | 9414.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
