Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine synthase subunit ii | SAMN05444000_103266 | Not Available | Negative | 861759 - 863924 | 76289.4 |
| hypothetical protein | SAMN05444000_103267 | Not Available | Negative | 864008 - 865252 | 44914.3 |
| small-conductance mechanosensitive channel | SAMN05444000_103268 | Not Available | Negative | 865227 - 867530 | 83328.6 |
| transcriptional regulator, lysr family | SAMN05444000_103269 | Not Available | Negative | 867800 - 868717 | 34524.6 |
| indolepyruvate ferredoxin oxidoreductase | SAMN05444000_103270 | Not Available | Positive | 868888 - 872307 | 124182.0 |
| putative hemolysin | SAMN05444000_103271 | Not Available | Positive | 872407 - 873285 | 32388.2 |
| glutamate racemase | SAMN05444000_103272 | Not Available | Positive | 873307 - 874119 | 29256.9 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN05444000_103273 | Not Available | Positive | 874227 - 875261 | 37712.4 |
| cytochrome c-type biogenesis protein ccme | SAMN05444000_103274 | Not Available | Positive | 875282 - 875725 | 15995.1 |
| predicted peptidoglycan domain-containing protein | SAMN05444000_103275 | Not Available | Positive | 875868 - 876479 | 22477.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
