Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_103256 | Not Available | Positive | 854291 - 855253 | 33635.4 |
| methyltransferase, fkbm family | SAMN05444000_103257 | Not Available | Positive | 855291 - 856112 | 29756.6 |
| transketolase | SAMN05444000_103258 | Not Available | Negative | 856190 - 858208 | 72738.1 |
| hypothetical protein | SAMN05444000_103259 | Not Available | Positive | 858451 - 859116 | 23737.7 |
| cell division protein zapa | SAMN05444000_103260 | Not Available | Positive | 859116 - 859499 | 13629.4 |
| monothiol glutaredoxin | SAMN05444000_103261 | Not Available | Negative | 859582 - 859944 | 13156.5 |
| hypothetical protein | SAMN05444000_103262 | Not Available | Negative | 859941 - 860174 | 8450.36 |
| stress-induced morphogen (activity unknown) | SAMN05444000_103263 | Not Available | Negative | 860171 - 860401 | 7978.47 |
| protein n-acetyltransferase, rimj/riml family | SAMN05444000_103264 | Not Available | Negative | 860466 - 860960 | 18572.8 |
| ureidoglycolate lyase | SAMN05444000_103265 | Not Available | Negative | 860957 - 861613 | 24319.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
