Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hint domain-containing protein | SAMN05444000_103236 | Not Available | Positive | 834447 - 834989 | 19927.3 |
| hypothetical protein | SAMN05444000_103237 | Not Available | Positive | 834986 - 835753 | 26721.8 |
| predicted arabinose efflux permease, mfs family | SAMN05444000_103238 | Not Available | Positive | 836047 - 837312 | 44690.5 |
| uncharacterized conserved protein, duf924 family | SAMN05444000_103239 | Not Available | Positive | 837413 - 838003 | 22544.7 |
| hypothetical protein | SAMN05444000_103240 | Not Available | Negative | 838000 - 838398 | 14269.5 |
| dihydrolipoamide dehydrogenase | SAMN05444000_103241 | Not Available | Positive | 838549 - 839943 | 49513.5 |
| excinuclease abc subunit a | SAMN05444000_103242 | Not Available | Positive | 840185 - 843043 | 105596.0 |
| hypothetical protein | SAMN05444000_103243 | Not Available | Negative | 843115 - 843426 | 11171.8 |
| protein of unknown function | SAMN05444000_103244 | Not Available | Negative | 843501 - 843698 | 6942.68 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05444000_103245 | Not Available | Negative | 843822 - 844694 | 29495.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
