Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_103179 | Not Available | Negative | 783128 - 783937 | 29290.4 |
| biotin-lipoyl like | SAMN05444000_103180 | Not Available | Negative | 783994 - 784359 | 13864.0 |
| hypothetical protein | SAMN05444000_103181 | Not Available | Negative | 784363 - 784725 | 12768.8 |
| lsu ribosomal protein l9p | SAMN05444000_103182 | Not Available | Negative | 784873 - 785502 | 22106.7 |
| ssu ribosomal protein s18p | SAMN05444000_103183 | Not Available | Negative | 785515 - 785742 | 8593.71 |
| ribosomal protein s6 | SAMN05444000_103184 | Not Available | Negative | 785770 - 786303 | 20329.6 |
| hypothetical protein | SAMN05444000_103185 | Not Available | Positive | 786387 - 786881 | 17651.5 |
| polyisoprenoid-binding protein ycei | SAMN05444000_103186 | Not Available | Positive | 787041 - 787613 | 20370.2 |
| cytochrome b561 | SAMN05444000_103187 | Not Available | Negative | 787689 - 788909 | 43074.6 |
| [acyl-carrier-protein] s-malonyltransferase | SAMN05444000_103188 | Not Available | Positive | 789069 - 790007 | 32055.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
