Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-glutamine synthetase | SAMN05444000_103169 | Not Available | Negative | 772825 - 774231 | 52255.5 |
| nitrogen regulatory protein p-ii family | SAMN05444000_103170 | Not Available | Negative | 774264 - 774602 | 12241.7 |
| yjef c-terminal region, hydroxyethylthiazole kinase-related/yjef n-terminal region | SAMN05444000_103171 | Not Available | Positive | 774775 - 776361 | 55260.9 |
| hint domain-containing protein | SAMN05444000_103172 | Not Available | Positive | 776458 - 777525 | 38082.5 |
| Trna-leu | Not Available | Not Available | Positive | 777592 - 777676 | Not Available |
| hypothetical protein | SAMN05444000_103174 | Not Available | Positive | 778027 - 778824 | 30663.7 |
| conserved hypothetical protein | SAMN05444000_103175 | Not Available | Negative | 779092 - 779763 | 24504.3 |
| hypothetical protein | SAMN05444000_103176 | Not Available | Positive | 779919 - 781094 | 42632.2 |
| trigger factor | SAMN05444000_103177 | Not Available | Positive | 781224 - 782558 | 49524.1 |
| uncharacterized conserved protein, duf1330 family | SAMN05444000_103178 | Not Available | Positive | 782711 - 783124 | 15475.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
