Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme exporter protein c | SAMN05444000_103149 | Not Available | Positive | 755317 - 756048 | 27289.9 |
| heme exporter protein d | SAMN05444000_103150 | Not Available | Positive | 756045 - 756197 | 5462.88 |
| cytochrome c biogenesis protein ccmg, thiol:disulfide interchange protein dsbe | SAMN05444000_103151 | Not Available | Positive | 756190 - 756747 | 20094.4 |
| dimethylargininase | SAMN05444000_103152 | Not Available | Negative | 756751 - 757539 | 28203.3 |
| hypothetical protein | SAMN05444000_103153 | Not Available | Negative | 757636 - 757725 | 3293.31 |
| choline/glycine/proline betaine transport protein/glycine betaine transporter | SAMN05444000_103154 | Not Available | Negative | 757712 - 759214 | 54381.6 |
| aconitase | SAMN05444000_103155 | Not Available | Negative | 759324 - 762011 | 96915.0 |
| hypothetical protein | SAMN05444000_103156 | Not Available | Positive | 762216 - 762914 | 25823.0 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN05444000_103157 | Not Available | Negative | 762929 - 763822 | 33511.7 |
| threonine/homoserine efflux transporter rhta | SAMN05444000_103158 | Not Available | Negative | 763829 - 764686 | 30833.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
