Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| omega-6 fatty acid desaturase (delta-12 desaturase) | SAMN05444000_103139 | Not Available | Positive | 746447 - 747433 | 38143.1 |
| seryl-trna synthetase | SAMN05444000_103140 | Not Available | Negative | 747596 - 748888 | 46825.6 |
| hypothetical protein | SAMN05444000_103141 | Not Available | Positive | 748930 - 749502 | 22334.6 |
| protein translocase subunit yajc | SAMN05444000_103142 | Not Available | Positive | 749624 - 749908 | 10322.0 |
| preprotein translocase subunit secd | SAMN05444000_103143 | Not Available | Positive | 749930 - 751591 | 59396.1 |
| protein translocase subunit secf | SAMN05444000_103144 | Not Available | Positive | 751595 - 752563 | 35347.5 |
| hypothetical protein | SAMN05444000_103145 | Not Available | Positive | 752556 - 753308 | 26772.9 |
| uncharacterized conserved protein, contains mth938-like domain | SAMN05444000_103146 | Not Available | Positive | 753320 - 753682 | 12933.5 |
| heme exporter protein a | SAMN05444000_103147 | Not Available | Positive | 753928 - 754554 | 21649.1 |
| heme exporter protein b | SAMN05444000_103148 | Not Available | Positive | 754551 - 755207 | 22614.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
