Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_10399 | Not Available | Negative | 704301 - 704429 | 4558.6 |
| Trna-pro | Not Available | Not Available | Positive | 704595 - 704671 | Not Available |
| merr hth family regulatory protein | SAMN05444000_103101 | Not Available | Negative | 704731 - 705687 | 34450.4 |
| integration host factor subunit alpha | SAMN05444000_103102 | Not Available | Negative | 705703 - 706005 | 11056.3 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN05444000_103103 | Not Available | Negative | 706130 - 707104 | 34520.3 |
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN05444000_103104 | Not Available | Negative | 707101 - 708207 | 38750.6 |
| lsu ribosomal protein l32p | SAMN05444000_103105 | Not Available | Negative | 708228 - 708434 | 7573.75 |
| uncharacterized metal-binding protein yced, duf177 family | SAMN05444000_103106 | Not Available | Negative | 708574 - 709140 | 20596.4 |
| beta-barrel assembly machine subunit bame | SAMN05444000_103107 | Not Available | Positive | 709228 - 709674 | 16280.6 |
| ornithine-acyl[acyl carrier protein] n-acyltransferase | SAMN05444000_103108 | Not Available | Positive | 709751 - 710488 | 27782.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
