Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, upf0335 family | SAMN05444000_10389 | Not Available | Positive | 696323 - 696583 | 9995.89 |
| arac-type dna-binding protein | SAMN05444000_10390 | Not Available | Positive | 696969 - 697970 | 37492.4 |
| arylsulfatase | SAMN05444000_10391 | Not Available | Negative | 698144 - 700516 | 86864.8 |
| hypothetical protein | SAMN05444000_10392 | Not Available | Positive | 700879 - 701670 | 28853.9 |
| hypothetical protein | SAMN05444000_10393 | Not Available | Positive | 701667 - 701873 | 7000.65 |
| hypothetical protein | SAMN05444000_10394 | Not Available | Negative | 701951 - 702145 | 6964.53 |
| hypothetical protein | SAMN05444000_10395 | Not Available | Negative | 702161 - 702667 | 18049.2 |
| hypothetical protein | SAMN05444000_10396 | Not Available | Negative | 702657 - 702893 | 8413.94 |
| arac-type dna-binding protein | SAMN05444000_10397 | Not Available | Negative | 702943 - 703320 | 14217.3 |
| hypothetical protein | SAMN05444000_10398 | Not Available | Positive | 703583 - 703711 | 4868.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
