Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_10379 | Not Available | Positive | 686854 - 689544 | 96631.9 |
| flagellar motor switch protein flim | SAMN05444000_10380 | Not Available | Positive | 689617 - 690687 | 37542.5 |
| tigr01244 family protein | SAMN05444000_10381 | Not Available | Negative | 690705 - 691133 | 14801.5 |
| hypothetical protein | SAMN05444000_10382 | Not Available | Negative | 691144 - 691578 | 15067.6 |
| hypothetical protein | SAMN05444000_10383 | Not Available | Negative | 691578 - 692015 | 15015.1 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444000_10384 | Not Available | Negative | 692090 - 692953 | 31494.1 |
| transcriptional regulator, trar/dksa family | SAMN05444000_10385 | Not Available | Positive | 693087 - 693416 | 12285.5 |
| hypothetical protein | SAMN05444000_10386 | Not Available | Positive | 693439 - 693654 | 8259.72 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN05444000_10387 | Not Available | Positive | 693829 - 695922 | 75277.9 |
| hypothetical protein | SAMN05444000_10388 | Not Available | Negative | 695939 - 696217 | 10009.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
