Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_10359 | Not Available | Negative | 670448 - 670837 | 14107.7 |
| nitrile hydratase | SAMN05444000_10360 | Not Available | Positive | 671074 - 671694 | 22957.6 |
| nitrile hydratase | SAMN05444000_10361 | Not Available | Positive | 671691 - 672362 | 23981.0 |
| nitrile hydratase accessory protein | SAMN05444000_10362 | Not Available | Positive | 672359 - 672673 | 11629.7 |
| hypothetical protein | SAMN05444000_10363 | Not Available | Negative | 672760 - 673155 | 15003.8 |
| adenylosuccinate synthetase | SAMN05444000_10364 | Not Available | Positive | 673289 - 674584 | 46658.7 |
| protein of unknown function | SAMN05444000_10365 | Not Available | Positive | 674596 - 674832 | 8661.92 |
| nad dependent epimerase/dehydratase family protein | SAMN05444000_10366 | Not Available | Positive | 674888 - 675226 | 12394.1 |
| hypothetical protein | SAMN05444000_10367 | Not Available | Negative | 675145 - 675300 | 5681.87 |
| hypothetical protein | SAMN05444000_10368 | Not Available | Negative | 675320 - 677581 | 81236.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
