Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444000_10349 | Not Available | Negative | 662881 - 663591 | 25133.5 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05444000_10350 | Not Available | Negative | 663626 - 664402 | 28398.9 |
| abc transporter, phosphonate, substrate-binding protein | SAMN05444000_10351 | Not Available | Negative | 664532 - 665266 | 26536.8 |
| uncharacterized conserved protein, tellurite resistance protein b (terb) family | SAMN05444000_10352 | Not Available | Negative | 665263 - 665700 | 15834.7 |
| uncharacterized conserved protein, tellurite resistance protein b (terb) family | SAMN05444000_10353 | Not Available | Negative | 665834 - 666250 | 15612.8 |
| uncharacterized conserved protein, duf1330 family | SAMN05444000_10354 | Not Available | Negative | 666250 - 666543 | 10686.5 |
| hypothetical protein | SAMN05444000_10355 | Not Available | Negative | 666579 - 667274 | 24794.7 |
| hypothetical protein | SAMN05444000_10356 | Not Available | Negative | 667357 - 668019 | 23572.0 |
| ctp synthase | SAMN05444000_10357 | Not Available | Negative | 668063 - 669706 | 60630.2 |
| preprotein translocase subunit secg | SAMN05444000_10358 | Not Available | Negative | 669892 - 670242 | 11538.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
