Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_10329 | Not Available | Negative | 642619 - 643476 | 31603.0 |
| uncharacterized membrane protein | SAMN05444000_10330 | Not Available | Negative | 643502 - 643804 | 10117.9 |
| uncharacterized membrane protein | SAMN05444000_10331 | Not Available | Negative | 643937 - 644242 | 10088.8 |
| threonyl-trna synthetase | SAMN05444000_10332 | Not Available | Negative | 644477 - 646426 | 74107.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444000_10333 | Not Available | Positive | 646583 - 647332 | 27073.2 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN05444000_10334 | Not Available | Positive | 647340 - 648353 | 36714.9 |
| hypothetical protein | SAMN05444000_10335 | Not Available | Positive | 648358 - 648807 | 16114.7 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444000_10336 | Not Available | Positive | 648889 - 649599 | 25949.9 |
| poly(3-hydroxybutyrate) depolymerase | SAMN05444000_10337 | Not Available | Negative | 649668 - 650945 | 47136.3 |
| polyhydroxyalkanoate synthase | SAMN05444000_10338 | Not Available | Positive | 651053 - 652846 | 67516.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
