Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactoylglutathione lyase | SAMN05444000_10319 | Not Available | Negative | 637677 - 638105 | 16111.9 |
| thymidylate synthase | SAMN05444000_10320 | Not Available | Positive | 638241 - 639071 | 31320.3 |
| dihydrofolate reductase | SAMN05444000_10321 | Not Available | Positive | 639074 - 639550 | 17704.2 |
| hypothetical protein | SAMN05444000_10322 | Not Available | Negative | 639551 - 639793 | 9038.29 |
| hypothetical protein | SAMN05444000_10323 | Not Available | Positive | 639853 - 640134 | 9319.17 |
| cold-shock dna-binding protein family | SAMN05444000_10324 | Not Available | Negative | 640171 - 640377 | 7229.51 |
| arsenate reductase, glutaredoxin family | SAMN05444000_10325 | Not Available | Positive | 640592 - 640903 | 11672.2 |
| hypothetical protein | SAMN05444000_10326 | Not Available | Positive | 640952 - 641320 | 12675.7 |
| putative oxidoreductase | SAMN05444000_10327 | Not Available | Negative | 641309 - 641863 | 20178.8 |
| putative dna-binding domain-containing protein | SAMN05444000_10328 | Not Available | Negative | 641873 - 642622 | 26934.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
