Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_1039 | Not Available | Negative | 630153 - 630437 | 10370.2 |
| polyphosphate kinase 2, pa0141 family | SAMN05444000_10310 | Not Available | Positive | 630653 - 631627 | 36999.9 |
| tigr02453 family protein | SAMN05444000_10311 | Not Available | Negative | 631647 - 632291 | 23748.7 |
| multidrug resistance protein, mate family | SAMN05444000_10312 | Not Available | Positive | 632388 - 633755 | 48614.9 |
| hypothetical protein | SAMN05444000_10313 | Not Available | Negative | 633752 - 634159 | 15693.9 |
| aspartate aminotransferase | SAMN05444000_10314 | Not Available | Negative | 634169 - 635371 | 42956.2 |
| transcriptional regulator, contains xre-family hth domain | SAMN05444000_10315 | Not Available | Positive | 635456 - 635884 | 15896.7 |
| antitoxin cptb | SAMN05444000_10316 | Not Available | Positive | 635877 - 636182 | 11575.9 |
| transcriptional regulator, marr family | SAMN05444000_10317 | Not Available | Positive | 636320 - 636817 | 18883.7 |
| protein of unknown function | SAMN05444000_10318 | Not Available | Negative | 636982 - 637710 | 25959.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
