Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN05444000_102278 | Not Available | Positive | 611502 - 612053 | 20774.8 |
| hypothetical protein | SAMN05444000_102279 | Not Available | Positive | 612199 - 613038 | 30857.5 |
| hypothetical protein | SAMN05444000_102280 | Not Available | Positive | 613282 - 613563 | 10339.3 |
| glutamate:na+ symporter, ess family | SAMN05444000_102281 | Not Available | Negative | 614239 - 615450 | 42277.0 |
| tellurite resistance protein | SAMN05444000_102282 | Not Available | Negative | 615830 - 616252 | 15477.5 |
| lysyl-trna synthetase, class i | SAMN05444000_102283 | Not Available | Positive | 616372 - 618015 | 61528.7 |
| protein of unknown function | SAMN05444000_102284 | Not Available | Positive | 618047 - 618781 | 28386.4 |
| helix-turn-helix domain-containing protein | SAMN05444000_102285 | Not Available | Positive | 619248 - 619451 | 7624.07 |
| hypothetical protein | SAMN05444000_102286 | Not Available | Positive | 619522 - 620028 | 18561.1 |
| hypothetical protein | SAMN05444000_102287 | Not Available | Positive | 620025 - 620210 | 6876.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
