Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN05444000_102248 | Not Available | Negative | 581353 - 582156 | 30248.3 |
| iron(iii) transport system atp-binding protein | SAMN05444000_102249 | Not Available | Positive | 582344 - 583405 | 38190.1 |
| arac-type dna-binding protein | SAMN05444000_102250 | Not Available | Positive | 583484 - 584497 | 37922.0 |
| udp-n-acetyl-d-galactosamine dehydrogenase | SAMN05444000_102251 | Not Available | Positive | 584680 - 585975 | 47199.2 |
| hypothetical protein | SAMN05444000_102252 | Not Available | Positive | 586127 - 586801 | 25945.3 |
| binding-protein-dependent transport system inner membrane component | SAMN05444000_102253 | Not Available | Positive | 586832 - 587254 | 15090.2 |
| hypothetical protein | SAMN05444000_102254 | Not Available | Positive | 587251 - 587652 | 14620.1 |
| binding-protein-dependent transport system inner membrane component | SAMN05444000_102255 | Not Available | Positive | 587667 - 588035 | 13319.7 |
| enoyl-coa hydratase/e-phenylitaconyl-coa hydratase | SAMN05444000_102256 | Not Available | Positive | 588058 - 588843 | 28714.6 |
| hypothetical protein | SAMN05444000_102257 | Not Available | Positive | 588840 - 589028 | 6651.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
