Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, asnc family | SAMN05444000_102238 | Not Available | Positive | 571322 - 571777 | 16865.6 |
| aspartate aminotransferase | SAMN05444000_102239 | Not Available | Positive | 571860 - 572978 | 39769.6 |
| peptidase m50b-like | SAMN05444000_102240 | Not Available | Negative | 572981 - 573640 | 23524.5 |
| 2-octaprenyl-6-methoxyphenol hydroxylase | SAMN05444000_102241 | Not Available | Negative | 573670 - 574872 | 43615.7 |
| putative hydrolase of the had superfamily | SAMN05444000_102242 | Not Available | Negative | 574955 - 575497 | 20007.7 |
| transcriptional regulator, gntr family | SAMN05444000_102243 | Not Available | Positive | 575711 - 576349 | 23749.2 |
| hypothetical protein | SAMN05444000_102244 | Not Available | Negative | 576305 - 578218 | 71099.6 |
| carbamoyl-phosphate synthase small subunit | SAMN05444000_102245 | Not Available | Negative | 578299 - 579453 | 41246.5 |
| hypothetical protein | SAMN05444000_102246 | Not Available | Positive | 579624 - 580094 | 17029.6 |
| alcohol dehydrogenase, class iv | SAMN05444000_102247 | Not Available | Negative | 580190 - 581356 | 41341.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
