Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylamine--glycine ligase | SAMN05444000_102207 | Not Available | Negative | 536188 - 537450 | 44073.2 |
| exodeoxyribonuclease vii large subunit | SAMN05444000_102208 | Not Available | Positive | 537526 - 539010 | 53808.9 |
| hypothetical protein | SAMN05444000_102209 | Not Available | Negative | 539102 - 539491 | 14842.3 |
| alkane 1-monooxygenase | SAMN05444000_102210 | Not Available | Negative | 539531 - 540565 | 38075.7 |
| nad-dependent formate dehydrogenase flavoprotein subunit | SAMN05444000_102211 | Not Available | Positive | 540754 - 542442 | 60794.2 |
| uncharacterized membrane protein yhhn | SAMN05444000_102212 | Not Available | Positive | 542529 - 543221 | 24482.5 |
| fused signal recognition particle receptor | SAMN05444000_102213 | Not Available | Positive | 543262 - 544485 | 43072.6 |
| eama-like transporter family protein | SAMN05444000_102214 | Not Available | Positive | 544567 - 545469 | 32322.2 |
| intracellular septation protein | SAMN05444000_102215 | Not Available | Positive | 545507 - 546112 | 22676.5 |
| gst-like protein | SAMN05444000_102216 | Not Available | Negative | 546193 - 546888 | 26198.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
