Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-5-phosphate isomerase | SAMN05444000_102197 | Not Available | Positive | 527345 - 528133 | 28230.8 |
| nadph-glutathione reductase | SAMN05444000_102198 | Not Available | Positive | 528143 - 529498 | 49136.0 |
| protease ftsh subunit hflk | SAMN05444000_102199 | Not Available | Positive | 529565 - 530710 | 40433.4 |
| protease ftsh subunit hflc | SAMN05444000_102200 | Not Available | Positive | 530707 - 531579 | 32404.7 |
| hypothetical protein | SAMN05444000_102201 | Not Available | Positive | 531576 - 531773 | 6796.8 |
| serine protease do | SAMN05444000_102202 | Not Available | Positive | 531917 - 533380 | 51631.3 |
| putative peptidoglycan binding domain-containing protein | SAMN05444000_102203 | Not Available | Negative | 533980 - 534534 | 20146.0 |
| ob-fold nucleic acid binding domain-containing protein | SAMN05444000_102204 | Not Available | Negative | 534606 - 534965 | 13169.0 |
| ferredoxin, 2fe-2s | SAMN05444000_102205 | Not Available | Positive | 535091 - 535414 | 11720.8 |
| hypothetical protein | SAMN05444000_102206 | Not Available | Positive | 535414 - 536175 | 27814.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
