Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide synthase | SAMN05444000_102147 | Not Available | Negative | 479275 - 480351 | 38733.3 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SAMN05444000_102148 | Not Available | Negative | 480344 - 480832 | 16795.5 |
| hypothetical protein | SAMN05444000_102149 | Not Available | Negative | 480878 - 481102 | 8614.5 |
| molecular chaperone ibpa, hsp20 family | SAMN05444000_102150 | Not Available | Positive | 481263 - 481676 | 15517.4 |
| hypothetical protein | SAMN05444000_102151 | Not Available | Positive | 481680 - 481907 | 8640.06 |
| glycosyltransferase family 10 (fucosyltransferase) c-term | SAMN05444000_102152 | Not Available | Positive | 482026 - 482901 | 32807.6 |
| sulfate adenylyltransferase | SAMN05444000_102153 | Not Available | Negative | 482951 - 485026 | 77015.8 |
| adenylate/guanylate cyclase | SAMN05444000_102154 | Not Available | Negative | 485190 - 486878 | 61381.9 |
| thioredoxin reductase (nadph) | SAMN05444000_102155 | Not Available | Negative | 486985 - 487926 | 33607.2 |
| transcriptional regulator, asnc family | SAMN05444000_102156 | Not Available | Positive | 488138 - 488638 | 18451.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
