Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s4p | SAMN05444000_102107 | Not Available | Positive | 439801 - 440421 | 23595.5 |
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN05444000_102108 | Not Available | Negative | 440491 - 441243 | 27124.2 |
| histidinol-phosphate aminotransferase | SAMN05444000_102109 | Not Available | Positive | 441521 - 442606 | 38697.4 |
| prephenate dehydrogenase | SAMN05444000_102110 | Not Available | Positive | 442603 - 443529 | 33138.3 |
| uncharacterized conserved protein | SAMN05444000_102111 | Not Available | Positive | 443526 - 444398 | 30948.8 |
| hypothetical protein | SAMN05444000_102112 | Not Available | Negative | 444395 - 445390 | 36110.0 |
| cation transport protein chac | SAMN05444000_102113 | Not Available | Positive | 445457 - 445987 | 19866.4 |
| hypothetical protein | SAMN05444000_102114 | Not Available | Positive | 446096 - 447292 | 43332.6 |
| chemotaxis protein motb | SAMN05444000_102115 | Not Available | Positive | 447296 - 449305 | 71764.3 |
| fad/fmn-containing dehydrogenase | SAMN05444000_102116 | Not Available | Negative | 449302 - 450711 | 50675.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
