Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tungstate transport system substrate-binding protein | SAMN05444000_10247 | Not Available | Positive | 371991 - 372794 | 28629.8 |
| hypothetical protein | SAMN05444000_10248 | Not Available | Negative | 372996 - 374609 | 58155.3 |
| stealth protein cr2, conserved region 2 | SAMN05444000_10249 | Not Available | Positive | 374918 - 375886 | 37225.2 |
| aldo/keto reductase family protein | SAMN05444000_10250 | Not Available | Positive | 376195 - 376530 | 11770.2 |
| lysr family transcriptional regulator, glycine cleavage system transcriptional activator | SAMN05444000_10251 | Not Available | Negative | 376504 - 377412 | 33849.7 |
| glyoxylate/hydroxypyruvate reductase a | SAMN05444000_10252 | Not Available | Positive | 377661 - 378590 | 34303.8 |
| glycine/d-amino acid oxidase | SAMN05444000_10253 | Not Available | Positive | 378590 - 379906 | 48043.9 |
| acetolactate synthase-1/2/3 large subunit | SAMN05444000_10254 | Not Available | Negative | 379930 - 381486 | 54321.3 |
| glyoxylate/hydroxypyruvate reductase a | SAMN05444000_10255 | Not Available | Negative | 381488 - 382417 | 33852.5 |
| trimethylamine---corrinoid protein co-methyltransferase | SAMN05444000_10256 | Not Available | Negative | 382420 - 383967 | 56965.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
