Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wgr domain-containing protein | SAMN05444000_11634 | Not Available | Positive | 2800769 - 2801017 | 9644.75 |
| n-carbamoyl-l-amino-acid hydrolase | SAMN05444000_11635 | Not Available | Negative | 2801021 - 2802217 | 42406.3 |
| nad-dependent formate dehydrogenase catalytic subunit /nad-dependent formate dehydrogenase iron-sulfur protein | SAMN05444000_11636 | Not Available | Negative | 2802303 - 2805080 | 101054.0 |
| broad specificity phosphatase phoe | SAMN05444000_11637 | Not Available | Positive | 2805275 - 2805928 | 24625.3 |
| uncharacterized conserved protein, contains zn-finger domain | SAMN05444000_11638 | Not Available | Negative | 2805949 - 2806125 | 6475.55 |
| abc-2 type transport system atp-binding protein | SAMN05444000_11639 | Not Available | Positive | 2806223 - 2807155 | 33788.6 |
| protein of unknown function | SAMN05444000_11640 | Not Available | Negative | 2807152 - 2807619 | 17281.4 |
| core-2/i-branching enzyme | SAMN05444000_11641 | Not Available | Negative | 2807690 - 2809267 | 61796.1 |
| sulfotransferase family protein | SAMN05444000_11642 | Not Available | Positive | 2809417 - 2810235 | 31371.9 |
| glutathione s-transferase | SAMN05444000_11643 | Not Available | Positive | 2810315 - 2810944 | 23213.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
