Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i serine peptidase. merops family s26a | SAMN05444000_101254 | Not Available | Positive | 266341 - 267177 | 30640.7 |
| rnase iii | SAMN05444000_101255 | Not Available | Positive | 267174 - 267857 | 24791.7 |
| gtp-binding protein era | SAMN05444000_101256 | Not Available | Positive | 267854 - 268759 | 33884.0 |
| hypothetical protein | SAMN05444000_101257 | Not Available | Positive | 268756 - 269088 | 12232.5 |
| dna replication and repair protein reco | SAMN05444000_101258 | Not Available | Positive | 269186 - 269917 | 26922.3 |
| heat shock protein hslj | SAMN05444000_101259 | Not Available | Negative | 269892 - 270296 | 14654.7 |
| transcriptional regulator, tetr family | SAMN05444000_101260 | Not Available | Negative | 270300 - 270851 | 20112.9 |
| (2s)-methylsuccinyl-coa dehydrogenase | SAMN05444000_101261 | Not Available | Negative | 270999 - 272660 | 60488.2 |
| hypothetical protein | SAMN05444000_101262 | Not Available | Positive | 272831 - 273598 | 26700.9 |
| predicted purr-regulated permease perm | SAMN05444000_101263 | Not Available | Positive | 273702 - 274802 | 39994.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
